Source code for nvtabular.ops.list_slice

#
# Copyright (c) 2021, NVIDIA CORPORATION.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
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import numba.cuda
import numpy as np

try:
    import cupy as cp
except ImportError:
    cp = None

from merlin.core.dispatch import DataFrameType, annotate, build_cudf_list_column, is_cpu_object
from merlin.schema import Tags
from nvtabular.ops.operator import ColumnSelector, Operator


[docs]class ListSlice(Operator):
    """Slices a list column

    This operator provides the ability to slice list column by row. For example, to truncate a
    list column to only include the first 10 elements per row::

        truncated = column_names >> ops.ListSlice(10)

    Take the first 10 items, ignoring the first element::

        truncated = column_names >> ops.ListSlice(1, 11)

    Take the last 10 items from each row::

        truncated = column_names >> ops.ListSlice(-10)

    Parameters
    -----------
    start: int
        The starting value to slice from if end isn't given, otherwise the end value to slice to
    end: int, optional
        The end value to slice to
    pad: bool, default False
        Whether to pad out rows to have the same number of elements. If not set rows may not all
        have the same number of entries.
    pad_value: float
        When pad=True, this is the value used to pad missing entries
    """

[docs]    def __init__(self, start, end=None, pad=False, pad_value=0.0):
        super().__init__()
        self.start = start
        self.end = end
        self.pad = pad
        self.pad_value = pad_value

        if self.start > 0 and self.end is None:
            self.end = self.start
            self.start = 0

        if self.end is None:
            self.end = np.iinfo(np.int64).max

        if self.start < 0:
            self.max_elements = -(self.start if self.end > 0 else self.start - self.end)
        else:
            self.max_elements = self.end - self.start

[docs]    @annotate("ListSlice_op", color="darkgreen", domain="nvt_python")
    def transform(self, col_selector: ColumnSelector, df: DataFrameType) -> DataFrameType:
        on_cpu = is_cpu_object(df)
        ret = type(df)()

        for col in col_selector.names:
            # handle CPU via normal python slicing (not very efficient)
            if on_cpu:
                values = [row[self.start : self.end] for row in df[col]]

                # pad out to so each row has self.max_elements if asked
                if self.pad:
                    for v in values:
                        if len(v) < self.max_elements:
                            v.extend([self.pad_value] * (self.max_elements - len(v)))

                ret[col] = values
            else:
                # figure out the size of each row from the list offsets
                c = df[col]._column
                offsets = c.offsets.values
                elements = c.elements.values

                threads = 32
                blocks = (offsets.size + threads - 1) // threads

                if self.pad:
                    new_offsets = cp.arange(offsets.size, dtype=offsets.dtype) * self.max_elements

                else:
                    # figure out the size of each row after slicing start/end
                    new_offsets = cp.zeros(offsets.size, dtype=offsets.dtype)

                    # calculate new row offsets after slicing
                    _calculate_row_sizes[blocks, threads](
                        self.start, self.end, offsets, new_offsets
                    )
                    new_offsets = cp.cumsum(new_offsets).astype(offsets.dtype)

                # create a new array for the sliced elements
                new_elements = cp.full(
                    new_offsets[-1].item(), fill_value=self.pad_value, dtype=elements.dtype
                )
                if new_elements.size:
                    _slice_rows[blocks, threads](
                        self.start, self.end, offsets, elements, new_offsets, new_elements
                    )

                # build up a list column with the sliced values
                ret[col] = build_cudf_list_column(new_elements, new_offsets)

        return ret

    def _compute_dtype(self, col_schema, input_schema):
        col_schema = super()._compute_dtype(col_schema, input_schema)
        return col_schema.with_dtype(col_schema.dtype)

    def _compute_properties(self, col_schema, input_schema):
        col_schema = super()._compute_properties(col_schema, input_schema)
        properties = {**col_schema.properties, **{"value_count": {"min": 0, "max": None}}}
        if self.max_elements != np.iinfo(np.int64).max:
            properties["value_count"]["max"] = self.max_elements
            if self.pad:
                properties["value_count"]["min"] = self.max_elements
        return col_schema.with_properties(properties)

    def _compute_shape(self, col_schema, input_schema):
        col_schema = super()._compute_shape(col_schema, input_schema)

        min_count, max_count = (0, None)
        if self.max_elements != np.iinfo(np.int64).max:
            max_count = self.max_elements
            if self.pad:
                min_count = self.max_elements

        return col_schema.with_shape((None, (min_count, max_count)))

    @property
    def output_tags(self):
        return [Tags.LIST]

    transform.__doc__ = Operator.transform.__doc__


@numba.cuda.jit
def _calculate_row_sizes(start, end, offsets, row_sizes):
    """given a slice (start/end) and existing offsets indicating row lengths, this
    calculates the size for each new row after slicing"""
    rowid = numba.cuda.grid(1)
    if rowid < offsets.size - 1:
        original_row_size = offsets[rowid + 1] - offsets[rowid]

        # handle negative slicing appropriately
        if start < 0:
            start = original_row_size + start
        if end < 0:
            end = original_row_size + end

        # clamp start/end to be in (0, original_row_size)
        start = min(max(0, start), original_row_size)
        end = min(max(0, end), original_row_size)

        row_sizes[rowid + 1] = end - start


@numba.cuda.jit
def _slice_rows(start, end, offsets, elements, new_offsets, new_elements):
    """slices rows of a list column. requires the 'new_offsets' to
    be previously calculated (meaning that we don't need the 'end' slice index
    since that's baked into the new_offsets"""
    rowid = numba.cuda.grid(1)
    if rowid < (new_offsets.size - 1):
        if start >= 0:
            offset = offsets[rowid] + start
        else:
            offset = offsets[rowid + 1] + start
            if offset < offsets[rowid]:
                offset = offsets[rowid]

        new_start = new_offsets[rowid]
        new_end = new_offsets[rowid + 1]

        # if we are padding (more new offsets than old offsets) - don't keep on iterating past
        # the end
        offset_delta = (new_end - new_start) - (offsets[rowid + 1] - offset)
        if offset_delta > 0:
            new_end -= offset_delta
        elif offset_delta == 0 and end < 0:
            new_end += end

        for new_offset in range(new_start, new_end):
            new_elements[new_offset] = elements[offset]
            offset += 1